Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC011481.3-201ENST00000623895 5594 ntBASIC13.21□□□□□ -0.29
LPCAT4Q643R3 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 C1QBPP1-201ENST00000400117 770 ntBASIC13.21□□□□□ -0.29
LPCAT4Q643R3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 SRD5A3P1-201ENST00000603021 949 ntBASIC13.21□□□□□ -0.29
LPCAT4Q643R3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC138466.3-201ENST00000619983 221 ntBASIC13.21□□□□□ -0.29
LPCAT4Q643R3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 PTPRVP-205ENST00000641549 5067 ntBASIC13.21□□□□□ -0.3
LPCAT4Q643R3 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 CICP2-201ENST00000420675 2328 ntBASIC13.21□□□□□ -0.3
LPCAT4Q643R3 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LPCAT4Q643R3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AC009533.1-201ENST00000539757 3158 ntBASIC13.2□□□□□ -0.3
LPCAT4Q643R3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 RPSAP43-201ENST00000402237 625 ntBASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AC134915.1-201ENST00000426461 574 ntBASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 GNAQP1-201ENST00000444815 1067 ntBASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AC027369.6-201ENST00000525520 931 ntBASIC13.2□□□□□ -0.3
LPCAT4Q643R3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms