Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATP7AQ04656 SERF2-205ENST00000403425 690 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP7AQ04656 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ATP7AQ04656 U3.41-201ENST00000408711 219 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC19.96■□□□□ 0.79
ATP7AQ04656 AKR1C6P-201ENST00000432950 983 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 Z84721.1-201ENST00000438841 372 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 RN7SL677P-201ENST00000466970 319 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 RNF7-205ENST00000480908 782 ntTSL 4 BASIC19.96■□□□□ 0.79
ATP7AQ04656 RN7SL76P-201ENST00000482435 289 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP7AQ04656 AC091691.1-201ENST00000583587 1018 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP7AQ04656 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 AC152010.1-201ENST00000415779 2006 ntBASIC19.96■□□□□ 0.79
ATP7AQ04656 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ATP7AQ04656 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP7AQ04656 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ATP7AQ04656 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP7AQ04656 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ATP7AQ04656 TBC1D3P1-201ENST00000590047 1693 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ATP7AQ04656 AC091807.1-201ENST00000418838 1544 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP7AQ04656 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ATP7AQ04656 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC19.95■□□□□ 0.78
ATP7AQ04656 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ATP7AQ04656 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP7AQ04656 OR2T32P-201ENST00000403423 963 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 BX088651.3-201ENST00000418155 352 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC19.95■□□□□ 0.78
ATP7AQ04656 RN7SL2-201ENST00000490232 300 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 RN7SL4P-201ENST00000584058 295 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP7AQ04656 AC245369.8-201ENST00000636589 306 ntBASIC19.95■□□□□ 0.78
ATP7AQ04656 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATP7AQ04656 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP7AQ04656 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP7AQ04656 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP7AQ04656 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP7AQ04656 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC020917.4-201ENST00000623994 1999 ntBASIC19.94■□□□□ 0.78
ATP7AQ04656 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ATP7AQ04656 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP7AQ04656 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC074019.1-201ENST00000428788 1096 ntBASIC19.94■□□□□ 0.78
ATP7AQ04656 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC19.94■□□□□ 0.78
ATP7AQ04656 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP7AQ04656 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP7AQ04656 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP7AQ04656 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP7AQ04656 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ATP7AQ04656 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ATP7AQ04656 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP7AQ04656 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP7AQ04656 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ATP7AQ04656 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP7AQ04656 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP7AQ04656 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATP7AQ04656 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP7AQ04656 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms