Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.34□□□□□ -0.27
SKP1P63208 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SKP1P63208 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.34□□□□□ -0.27
SKP1P63208 CHCHD2P9-201ENST00000461726 456 ntBASIC13.34□□□□□ -0.27
SKP1P63208 IMP3P2-201ENST00000489760 475 ntBASIC13.34□□□□□ -0.27
SKP1P63208 RN7SL81P-201ENST00000493781 261 ntBASIC13.34□□□□□ -0.27
SKP1P63208 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 AC134698.3-201ENST00000523880 214 ntBASIC13.34□□□□□ -0.27
SKP1P63208 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 CHMP4BP1-201ENST00000556017 588 ntBASIC13.34□□□□□ -0.27
SKP1P63208 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.34□□□□□ -0.27
SKP1P63208 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.34□□□□□ -0.27
SKP1P63208 RN7SL455P-201ENST00000580629 282 ntBASIC13.34□□□□□ -0.27
SKP1P63208 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SKP1P63208 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 AC011474.4-201ENST00000623523 2076 ntBASIC13.34□□□□□ -0.27
SKP1P63208 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SKP1P63208 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.34□□□□□ -0.27
SKP1P63208 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SKP1P63208 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SKP1P63208 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.34□□□□□ -0.27
SKP1P63208 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SKP1P63208 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SKP1P63208 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
SKP1P63208 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 MEX3B-202ENST00000558133 4333 ntBASIC13.33□□□□□ -0.28
SKP1P63208 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SKP1P63208 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SKP1P63208 OR2K2-202ENST00000374428 1038 ntBASIC13.33□□□□□ -0.28
SKP1P63208 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SKP1P63208 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 AL512306.1-201ENST00000432698 848 ntBASIC13.33□□□□□ -0.28
SKP1P63208 CEP164P1-201ENST00000455142 418 ntBASIC13.33□□□□□ -0.28
SKP1P63208 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.33□□□□□ -0.28
SKP1P63208 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.33□□□□□ -0.28
SKP1P63208 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 RN7SL767P-201ENST00000493013 295 ntBASIC13.33□□□□□ -0.28
SKP1P63208 AC019193.1-201ENST00000506678 823 ntBASIC13.33□□□□□ -0.28
SKP1P63208 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.33□□□□□ -0.28
SKP1P63208 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
SKP1P63208 AC103810.10-201ENST00000606504 343 ntBASIC13.33□□□□□ -0.28
SKP1P63208 AC009560.1-201ENST00000620208 434 ntBASIC13.33□□□□□ -0.28
SKP1P63208 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 LINC02486-201ENST00000604157 3000 ntBASIC13.33□□□□□ -0.28
SKP1P63208 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.33□□□□□ -0.28
SKP1P63208 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SKP1P63208 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.33□□□□□ -0.28
SKP1P63208 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
SKP1P63208 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SKP1P63208 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SKP1P63208 AC079781.5-202ENST00000641784 3743 ntBASIC13.33□□□□□ -0.28
SKP1P63208 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 AC067931.2-201ENST00000623655 2003 ntBASIC13.32□□□□□ -0.28
SKP1P63208 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 MAPK10-262ENST00000641051 5738 ntBASIC13.32□□□□□ -0.28
SKP1P63208 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SKP1P63208 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 AC018638.5-201ENST00000450885 754 ntBASIC13.32□□□□□ -0.28
SKP1P63208 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.32□□□□□ -0.28
SKP1P63208 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SKP1P63208 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.32□□□□□ -0.28
SKP1P63208 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms