Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PSEN1P49768 AHCYP4-201ENST00000419201 1315 ntBASIC15.28■□□□□ 0.04
PSEN1P49768 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.28■□□□□ 0.04
PSEN1P49768 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.28■□□□□ 0.04
PSEN1P49768 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 CCL7-202ENST00000394627 696 ntTSL 3 BASIC15.28■□□□□ 0.04
PSEN1P49768 SETD4-203ENST00000399205 1208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
PSEN1P49768 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 HESX1-202ENST00000473921 757 ntTSL 5 BASIC15.28■□□□□ 0.04
PSEN1P49768 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.28■□□□□ 0.04
PSEN1P49768 RPL5P23-201ENST00000496040 868 ntBASIC15.28■□□□□ 0.04
PSEN1P49768 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.28■□□□□ 0.04
PSEN1P49768 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC15.28■□□□□ 0.04
PSEN1P49768 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC15.28■□□□□ 0.04
PSEN1P49768 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC15.28■□□□□ 0.04
PSEN1P49768 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.28■□□□□ 0.04
PSEN1P49768 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC15.28■□□□□ 0.04
PSEN1P49768 AP003072.5-201ENST00000623872 773 ntBASIC15.28■□□□□ 0.04
PSEN1P49768 AL805961.1-203ENST00000641078 1258 ntBASIC15.28■□□□□ 0.04
PSEN1P49768 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.28■□□□□ 0.04
PSEN1P49768 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.28■□□□□ 0.04
PSEN1P49768 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.28■□□□□ 0.04
PSEN1P49768 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.28■□□□□ 0.04
PSEN1P49768 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.28■□□□□ 0.04
PSEN1P49768 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSEN1P49768 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PSEN1P49768 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 OR2I1P-210ENST00000642037 4691 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 RN7SKP214-201ENST00000364208 315 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PSEN1P49768 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSEN1P49768 MIR769-201ENST00000390225 118 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 NPM1P31-201ENST00000399021 764 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 RSL24D1P8-201ENST00000434442 492 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.27■□□□□ 0.04
PSEN1P49768 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC15.27■□□□□ 0.04
PSEN1P49768 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 TPT1P11-201ENST00000458482 498 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC15.27■□□□□ 0.04
PSEN1P49768 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.27■□□□□ 0.04
PSEN1P49768 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.27■□□□□ 0.04
PSEN1P49768 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.27■□□□□ 0.04
PSEN1P49768 AC006116.5-201ENST00000591936 559 ntBASIC15.27■□□□□ 0.04
PSEN1P49768 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.27■□□□□ 0.03
PSEN1P49768 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.03
PSEN1P49768 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.27■□□□□ 0.03
PSEN1P49768 MTHFR-210ENST00000641407 2387 ntBASIC15.27■□□□□ 0.03
PSEN1P49768 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PSEN1P49768 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PSEN1P49768 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.27■□□□□ 0.03
PSEN1P49768 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSEN1P49768 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PSEN1P49768 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.26■□□□□ 0.03
PSEN1P49768 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.26■□□□□ 0.03
PSEN1P49768 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PSEN1P49768 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms