Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC15.02■□□□□ -0
HTTP42858 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.02■□□□□ -0
HTTP42858 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC15.02■□□□□ -0
HTTP42858 OR7E122P-201ENST00000383606 1017 ntBASIC15.02■□□□□ -0
HTTP42858 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.02■□□□□ -0
HTTP42858 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.02■□□□□ -0
HTTP42858 AC140479.7-201ENST00000636301 2332 ntBASIC15.02■□□□□ -0
HTTP42858 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC15.02■□□□□ -0
HTTP42858 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HTTP42858 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HTTP42858 GGT8P-201ENST00000418938 532 ntBASIC15.02□□□□□ -0.01
HTTP42858 APRT-202ENST00000426324 664 ntTSL 2 BASIC15.02□□□□□ -0.01
HTTP42858 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC15.02□□□□□ -0.01
HTTP42858 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC15.02□□□□□ -0.01
HTTP42858 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.02□□□□□ -0.01
HTTP42858 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC15.02□□□□□ -0.01
HTTP42858 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC15.02□□□□□ -0.01
HTTP42858 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC15.02□□□□□ -0.01
HTTP42858 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HTTP42858 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.02□□□□□ -0.01
HTTP42858 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC15.02□□□□□ -0.01
HTTP42858 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HTTP42858 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HTTP42858 GBAP1-208ENST00000566701 1546 ntBASIC15.02□□□□□ -0.01
HTTP42858 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HTTP42858 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HTTP42858 POM121L14P-201ENST00000406100 1558 ntBASIC15.01□□□□□ -0.01
HTTP42858 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 SNORD23-201ENST00000408876 110 ntBASIC15.01□□□□□ -0.01
HTTP42858 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC15.01□□□□□ -0.01
HTTP42858 ACP1-207ENST00000439645 605 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC15.01□□□□□ -0.01
HTTP42858 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.01□□□□□ -0.01
HTTP42858 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HTTP42858 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC15.01□□□□□ -0.01
HTTP42858 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC15.01□□□□□ -0.01
HTTP42858 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC15.01□□□□□ -0.01
HTTP42858 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.01□□□□□ -0.01
HTTP42858 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 SERF2-205ENST00000403425 690 ntTSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC15.01□□□□□ -0.01
HTTP42858 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC15.01□□□□□ -0.01
HTTP42858 AP001505.1-201ENST00000569966 824 ntBASIC15.01□□□□□ -0.01
HTTP42858 CARS-216ENST00000639317 135 ntTSL 5 BASIC15.01□□□□□ -0.01
HTTP42858 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HTTP42858 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HTTP42858 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15□□□□□ -0.01
HTTP42858 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HTTP42858 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HTTP42858 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15□□□□□ -0.01
HTTP42858 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
HTTP42858 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 AL133517.1-201ENST00000413412 748 ntBASIC15□□□□□ -0.01
HTTP42858 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC15□□□□□ -0.01
HTTP42858 AC010677.1-201ENST00000441690 412 ntBASIC15□□□□□ -0.01
HTTP42858 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15□□□□□ -0.01
HTTP42858 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 AC007336.3-201ENST00000623886 2160 ntBASIC15□□□□□ -0.01
HTTP42858 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
HTTP42858 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HTTP42858 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC15□□□□□ -0.01
HTTP42858 KRT8P24-201ENST00000560290 1559 ntBASIC15□□□□□ -0.01
HTTP42858 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms