Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 CICP8-201ENST00000455800 2813 ntBASIC15.43■□□□□ 0.06
RFC5P40937 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.43■□□□□ 0.06
RFC5P40937 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFC5P40937 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.43■□□□□ 0.06
RFC5P40937 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 LYPLA2P1-203ENST00000447689 696 ntBASIC15.43■□□□□ 0.06
RFC5P40937 AC007279.1-201ENST00000448547 837 ntBASIC15.43■□□□□ 0.06
RFC5P40937 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.43■□□□□ 0.06
RFC5P40937 STK24P1-201ENST00000455035 1291 ntBASIC15.43■□□□□ 0.06
RFC5P40937 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.43■□□□□ 0.06
RFC5P40937 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFC5P40937 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 COA4-204ENST00000541455 1038 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.43■□□□□ 0.06
RFC5P40937 MIR5572-201ENST00000583188 137 ntBASIC15.43■□□□□ 0.06
RFC5P40937 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFC5P40937 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.43■□□□□ 0.06
RFC5P40937 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 AC090502.4-201ENST00000551714 1386 ntBASIC15.43■□□□□ 0.06
RFC5P40937 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.43■□□□□ 0.06
RFC5P40937 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.43■□□□□ 0.06
RFC5P40937 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFC5P40937 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
RFC5P40937 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.42■□□□□ 0.06
RFC5P40937 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RFC5P40937 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 DKKL1P1-201ENST00000400550 698 ntBASIC15.42■□□□□ 0.06
RFC5P40937 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 AL132994.1-201ENST00000554098 400 ntBASIC15.42■□□□□ 0.06
RFC5P40937 MIR4326-201ENST00000582203 59 ntBASIC15.42■□□□□ 0.06
RFC5P40937 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.42■□□□□ 0.06
RFC5P40937 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.42■□□□□ 0.06
RFC5P40937 AC105137.3-201ENST00000617588 984 ntBASIC15.42■□□□□ 0.06
RFC5P40937 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RFC5P40937 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFC5P40937 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.42■□□□□ 0.06
RFC5P40937 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms