Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AC092053.3-201ENST00000641308 4975 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA3P32297 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA3P32297 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 AC125604.1-201ENST00000496255 707 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.82□□□□□ -0.04
CHRNA3P32297 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.82□□□□□ -0.04
CHRNA3P32297 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AL132994.2-201ENST00000603120 687 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AC091544.8-201ENST00000619490 361 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CHRNA3P32297 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AL805961.1-203ENST00000641078 1258 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 MSNP1-201ENST00000511640 1732 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
CHRNA3P32297 FAM90A7P-201ENST00000382628 1395 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 FAM90A23P-201ENST00000400136 1395 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 AC025183.3-201ENST00000623526 1482 ntBASIC14.82□□□□□ -0.04
CHRNA3P32297 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA3P32297 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 AP000437.1-201ENST00000624057 2085 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 LINC01165-201ENST00000445190 1623 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 AC144522.1-201ENST00000625111 1658 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRNA3P32297 AC009779.1-201ENST00000551138 283 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 RBM8B-201ENST00000555532 525 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 RN7SL774P-201ENST00000577467 290 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRNA3P32297 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 AL590824.1-201ENST00000403828 1349 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 AC073869.1-201ENST00000415574 2762 ntBASIC14.81□□□□□ -0.04
CHRNA3P32297 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CHRNA3P32297 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA3P32297 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA3P32297 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms