Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC11.85□□□□□ -0.51
COL8A2P25067 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC11.85□□□□□ -0.51
COL8A2P25067 LINC00265-2P-201ENST00000413372 782 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 PPP1R2P4-201ENST00000424051 595 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 MIR4750-201ENST00000584564 56 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.85□□□□□ -0.51
COL8A2P25067 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 MIR6858-201ENST00000620733 67 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 AC130686.1-201ENST00000622936 2466 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.85□□□□□ -0.51
COL8A2P25067 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
COL8A2P25067 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
COL8A2P25067 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 AC068760.1-201ENST00000493579 1953 ntBASIC11.85□□□□□ -0.51
COL8A2P25067 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
COL8A2P25067 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
COL8A2P25067 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
COL8A2P25067 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
COL8A2P25067 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
COL8A2P25067 AL139158.3-201ENST00000641212 1562 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 AC011474.4-201ENST00000623523 2076 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
COL8A2P25067 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC11.84□□□□□ -0.51
COL8A2P25067 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.84□□□□□ -0.51
COL8A2P25067 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 CELP-201ENST00000411440 1249 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC11.84□□□□□ -0.51
COL8A2P25067 AC092638.2-201ENST00000441105 947 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 CSNK1G2P1-201ENST00000442675 955 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 AC004837.1-201ENST00000446267 564 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
COL8A2P25067 RN7SL564P-201ENST00000496309 250 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.84□□□□□ -0.51
COL8A2P25067 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 GAS7-216ENST00000583882 553 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC11.84□□□□□ -0.51
COL8A2P25067 GMFG-209ENST00000600322 622 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms