Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.51■□□□□ 0.23
HMGB1P09429 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.51■□□□□ 0.23
HMGB1P09429 AC024681.1-201ENST00000521917 487 ntBASIC16.51■□□□□ 0.23
HMGB1P09429 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HMGB1P09429 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HMGB1P09429 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 MIR3940-201ENST00000579148 102 ntBASIC16.51■□□□□ 0.23
HMGB1P09429 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
HMGB1P09429 AL109837.1-201ENST00000603272 613 ntBASIC16.51■□□□□ 0.23
HMGB1P09429 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGB1P09429 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGB1P09429 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HMGB1P09429 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HMGB1P09429 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HMGB1P09429 PPT1-213ENST00000641319 2388 ntBASIC16.51■□□□□ 0.23
HMGB1P09429 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HMGB1P09429 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGB1P09429 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGB1P09429 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HMGB1P09429 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGB1P09429 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HMGB1P09429 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGB1P09429 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 CALR4P-201ENST00000431943 946 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 AC098934.1-203ENST00000442868 1262 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 DUTP3-201ENST00000450025 415 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGB1P09429 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGB1P09429 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGB1P09429 AC026803.1-201ENST00000569130 274 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 RN7SL665P-201ENST00000578793 300 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 MIR6799-201ENST00000620297 69 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 AC004623.1-201ENST00000624592 2127 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 AL445250.1-201ENST00000641671 2259 ntBASIC16.5■□□□□ 0.23
HMGB1P09429 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HMGB1P09429 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGB1P09429 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
HMGB1P09429 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 AC020763.3-201ENST00000625095 2904 ntBASIC16.49■□□□□ 0.23
HMGB1P09429 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGB1P09429 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGB1P09429 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGB1P09429 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 LINC00638-201ENST00000555578 2518 ntBASIC16.49■□□□□ 0.23
HMGB1P09429 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGB1P09429 PDIA3P2-201ENST00000428073 158 ntBASIC16.49■□□□□ 0.23
HMGB1P09429 AC007274.1-201ENST00000439805 662 ntBASIC16.49■□□□□ 0.23
HMGB1P09429 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGB1P09429 AC099548.2-209ENST00000480264 625 ntBASIC16.49■□□□□ 0.23
HMGB1P09429 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGB1P09429 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGB1P09429 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms