Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.63□□□□□ -0.07
RB1P06400 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RB1P06400 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
RB1P06400 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RB1P06400 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.63□□□□□ -0.07
RB1P06400 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RB1P06400 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RB1P06400 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
RB1P06400 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RB1P06400 CICP14-201ENST00000629111 2732 ntBASIC14.63□□□□□ -0.07
RB1P06400 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RB1P06400 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RB1P06400 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RB1P06400 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC14.63□□□□□ -0.07
RB1P06400 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 MIR632-201ENST00000385193 94 ntBASIC14.62□□□□□ -0.07
RB1P06400 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RB1P06400 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 SDCBP2P1-201ENST00000416115 614 ntBASIC14.62□□□□□ -0.07
RB1P06400 AC098657.1-201ENST00000416270 1135 ntBASIC14.62□□□□□ -0.07
RB1P06400 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.62□□□□□ -0.07
RB1P06400 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.62□□□□□ -0.07
RB1P06400 RN7SL523P-201ENST00000484401 298 ntBASIC14.62□□□□□ -0.07
RB1P06400 AC099328.1-201ENST00000498809 1030 ntBASIC14.62□□□□□ -0.07
RB1P06400 AC011431.1-201ENST00000512971 230 ntBASIC14.62□□□□□ -0.07
RB1P06400 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 AP000920.1-201ENST00000531824 344 ntBASIC14.62□□□□□ -0.07
RB1P06400 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.62□□□□□ -0.07
RB1P06400 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.62□□□□□ -0.07
RB1P06400 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RB1P06400 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RB1P06400 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.61□□□□□ -0.07
RB1P06400 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.61□□□□□ -0.07
RB1P06400 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RB1P06400 MIR339-201ENST00000362153 94 ntBASIC14.61□□□□□ -0.07
RB1P06400 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 ASS1P1-201ENST00000402854 1237 ntBASIC14.61□□□□□ -0.07
RB1P06400 FAM197Y6-201ENST00000420524 766 ntBASIC14.61□□□□□ -0.07
RB1P06400 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.61□□□□□ -0.07
RB1P06400 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.61□□□□□ -0.07
RB1P06400 NDUFB2P1-201ENST00000506966 295 ntBASIC14.61□□□□□ -0.07
RB1P06400 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 CTBP2P6-201ENST00000526402 1229 ntBASIC14.61□□□□□ -0.07
RB1P06400 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms