Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.79□□□□□ -0.36
P04436 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
P04436 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.79□□□□□ -0.36
P04436 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.79□□□□□ -0.36
P04436 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.79□□□□□ -0.36
P04436 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.79□□□□□ -0.36
P04436 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.79□□□□□ -0.36
P04436 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.79□□□□□ -0.36
P04436 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P04436 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.79□□□□□ -0.36
P04436 AC092573.1-201ENST00000433054 884 ntBASIC12.79□□□□□ -0.36
P04436 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.79□□□□□ -0.36
P04436 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.79□□□□□ -0.36
P04436 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.79□□□□□ -0.36
P04436 AC104784.1-201ENST00000473096 294 ntBASIC12.79□□□□□ -0.36
P04436 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P04436 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.79□□□□□ -0.36
P04436 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 RN7SL357P-201ENST00000581065 298 ntBASIC12.79□□□□□ -0.36
P04436 LINC00244-201ENST00000625073 613 ntBASIC12.79□□□□□ -0.36
P04436 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.79□□□□□ -0.36
P04436 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.79□□□□□ -0.36
P04436 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
P04436 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.79□□□□□ -0.36
P04436 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 AC023908.3-201ENST00000564211 3047 ntBASIC12.79□□□□□ -0.36
P04436 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04436 AL009178.2-201ENST00000597278 2719 ntBASIC12.79□□□□□ -0.36
P04436 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.79□□□□□ -0.36
P04436 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 AC117489.1-201ENST00000625169 3217 ntBASIC12.79□□□□□ -0.36
P04436 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04436 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.79□□□□□ -0.36
P04436 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P04436 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.78□□□□□ -0.36
P04436 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.78□□□□□ -0.36
P04436 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
P04436 AC019109.1-201ENST00000401725 1874 ntBASIC12.78□□□□□ -0.36
P04436 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.78□□□□□ -0.36
P04436 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04436 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
P04436 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04436 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.78□□□□□ -0.36
P04436 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
P04436 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.78□□□□□ -0.36
P04436 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.78□□□□□ -0.36
P04436 OR2W2P-201ENST00000406313 909 ntBASIC12.78□□□□□ -0.36
P04436 MIR1307-201ENST00000408840 149 ntBASIC12.78□□□□□ -0.36
P04436 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.78□□□□□ -0.36
P04436 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04436 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.78□□□□□ -0.36
P04436 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.78□□□□□ -0.36
P04436 RN7SKP155-201ENST00000516031 288 ntBASIC12.78□□□□□ -0.36
P04436 RNA5SP406-201ENST00000516106 112 ntBASIC12.78□□□□□ -0.36
P04436 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.78□□□□□ -0.36
P04436 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.78□□□□□ -0.36
P04436 MIR4649-201ENST00000582839 64 ntBASIC12.78□□□□□ -0.36
P04436 MIR5572-201ENST00000583188 137 ntBASIC12.78□□□□□ -0.36
P04436 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.78□□□□□ -0.36
P04436 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.78□□□□□ -0.36
P04436 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
P04436 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms