Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.32□□□□□ -0.28
SCN2BO60939 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
SCN2BO60939 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN2BO60939 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.32□□□□□ -0.28
SCN2BO60939 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN2BO60939 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN2BO60939 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SCN2BO60939 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SCN2BO60939 AL096828.3-201ENST00000615354 462 ntBASIC13.32□□□□□ -0.28
SCN2BO60939 AL161773.1-201ENST00000624845 863 ntBASIC13.32□□□□□ -0.28
SCN2BO60939 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN2BO60939 MARK2P16-201ENST00000605714 1723 ntBASIC13.32□□□□□ -0.28
SCN2BO60939 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN2BO60939 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN2BO60939 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.32□□□□□ -0.28
SCN2BO60939 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.32□□□□□ -0.28
SCN2BO60939 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.32□□□□□ -0.28
SCN2BO60939 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SCN2BO60939 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SCN2BO60939 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCN2BO60939 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 AC024075.2-201ENST00000598112 1473 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
SCN2BO60939 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.31□□□□□ -0.28
SCN2BO60939 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.31□□□□□ -0.28
SCN2BO60939 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SCN2BO60939 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.31□□□□□ -0.28
SCN2BO60939 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.31□□□□□ -0.28
SCN2BO60939 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 MTX1P1-201ENST00000440904 838 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 AC022210.1-201ENST00000449856 793 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 EIF4HP1-201ENST00000453115 687 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 GPR53P-205ENST00000457298 1084 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.31□□□□□ -0.28
SCN2BO60939 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 RN7SL455P-201ENST00000580629 282 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 MIR4259-201ENST00000584466 101 ntBASIC13.31□□□□□ -0.28
SCN2BO60939 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCN2BO60939 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.31□□□□□ -0.28
SCN2BO60939 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.31□□□□□ -0.28
SCN2BO60939 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCN2BO60939 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SCN2BO60939 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCN2BO60939 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCN2BO60939 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SCN2BO60939 ZNF493-208ENST00000599461 1769 ntBASIC13.3□□□□□ -0.28
SCN2BO60939 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms