Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMAD6O43541 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SMAD6O43541 AC020763.3-201ENST00000625095 2904 ntBASIC14.08□□□□□ -0.16
SMAD6O43541 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SMAD6O43541 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SMAD6O43541 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SMAD6O43541 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.07□□□□□ -0.16
SMAD6O43541 AC012362.1-201ENST00000434906 739 ntBASIC14.07□□□□□ -0.16
SMAD6O43541 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.07□□□□□ -0.16
SMAD6O43541 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMAD6O43541 VENTXP3-201ENST00000546480 773 ntBASIC14.07□□□□□ -0.16
SMAD6O43541 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.07□□□□□ -0.16
SMAD6O43541 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SMAD6O43541 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.07□□□□□ -0.16
SMAD6O43541 AC002044.2-201ENST00000624910 970 ntBASIC14.07□□□□□ -0.16
SMAD6O43541 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMAD6O43541 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMAD6O43541 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMAD6O43541 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SMAD6O43541 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SMAD6O43541 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SMAD6O43541 AL357563.1-201ENST00000404728 395 ntBASIC14.06□□□□□ -0.16
SMAD6O43541 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.06□□□□□ -0.16
SMAD6O43541 LDHBP1-201ENST00000455730 1119 ntBASIC14.06□□□□□ -0.16
SMAD6O43541 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 IGHV3-37-201ENST00000518544 340 ntBASIC14.06□□□□□ -0.16
SMAD6O43541 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 AC226150.1-201ENST00000544259 466 ntBASIC14.06□□□□□ -0.16
SMAD6O43541 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.06□□□□□ -0.16
SMAD6O43541 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.06□□□□□ -0.16
SMAD6O43541 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.06□□□□□ -0.16
SMAD6O43541 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SMAD6O43541 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 AC040160.2-201ENST00000623816 1675 ntBASIC14.06□□□□□ -0.16
SMAD6O43541 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.06□□□□□ -0.16
SMAD6O43541 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SMAD6O43541 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 ST20-AS1-201ENST00000560255 4223 ntBASIC14.06□□□□□ -0.16
SMAD6O43541 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SMAD6O43541 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms