Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 KRT8P43-201ENST00000406052 1458 ntBASIC14.95□□□□□ -0.02
O00370 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 MARK2P16-201ENST00000605714 1723 ntBASIC14.95□□□□□ -0.02
O00370 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
O00370 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
O00370 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.94□□□□□ -0.02
O00370 SLC25A24P2-201ENST00000415059 510 ntBASIC14.94□□□□□ -0.02
O00370 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 BCYRN1-201ENST00000418539 200 ntBASIC14.94□□□□□ -0.02
O00370 AC007274.2-201ENST00000421675 662 ntBASIC14.94□□□□□ -0.02
O00370 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.94□□□□□ -0.02
O00370 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.94□□□□□ -0.02
O00370 SLC25A15P3-201ENST00000505530 290 ntBASIC14.94□□□□□ -0.02
O00370 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.94□□□□□ -0.02
O00370 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
O00370 AC012044.1-201ENST00000603431 297 ntBASIC14.94□□□□□ -0.02
O00370 AL021578.1-201ENST00000613646 709 ntBASIC14.94□□□□□ -0.02
O00370 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.94□□□□□ -0.02
O00370 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.94□□□□□ -0.02
O00370 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.94□□□□□ -0.02
O00370 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
O00370 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
O00370 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
O00370 AC008620.2-201ENST00000510294 1569 ntBASIC14.94□□□□□ -0.02
O00370 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
O00370 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
O00370 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
O00370 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
O00370 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 TBC1D3J-201ENST00000620719 1426 ntBASIC14.93□□□□□ -0.02
O00370 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 BEND3P3-201ENST00000611030 2440 ntBASIC14.93□□□□□ -0.02
O00370 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 Z82170.1-201ENST00000625081 3192 ntBASIC14.93□□□□□ -0.02
O00370 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 AL583805.1-201ENST00000391389 531 ntBASIC14.93□□□□□ -0.02
O00370 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.93□□□□□ -0.02
O00370 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.93□□□□□ -0.02
O00370 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.93□□□□□ -0.02
O00370 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.93□□□□□ -0.02
O00370 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.93□□□□□ -0.02
O00370 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.93□□□□□ -0.02
O00370 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.93□□□□□ -0.02
O00370 FGFR3P5-201ENST00000564496 886 ntBASIC14.93□□□□□ -0.02
O00370 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
O00370 AC006453.1-201ENST00000636037 1257 ntBASIC14.93□□□□□ -0.02
O00370 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 CAP2P1-201ENST00000557743 1390 ntBASIC14.93□□□□□ -0.02
O00370 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
O00370 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
O00370 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
O00370 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms