Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AL591163.1-201ENST00000641757 987 ntBASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 C2-209ENST00000452323 1999 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2D4Q9Y2X8 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 PPY2P-201ENST00000582808 702 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AJ011932.1-201ENST00000621707 465 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AC102953.2-201ENST00000609755 3026 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 OR2I1P-208ENST00000641137 4948 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 Z98885.3-201ENST00000624882 1757 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 AL139158.3-201ENST00000641212 1562 ntBASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2D4Q9Y2X8 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms