Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 RN7SL48P-201ENST00000579283 293 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 AC008825.2-201ENST00000603374 718 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 AC021016.3-201ENST00000608367 477 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 MIR8072-201ENST00000614241 80 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 AC027601.3-201ENST00000622907 509 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 AC025183.3-201ENST00000623526 1482 ntBASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KCNIP3Q9Y2W7 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AL357140.3-201ENST00000639753 1983 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AP002008.2-201ENST00000635926 4870 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC008620.2-201ENST00000510294 1569 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC107375.1-201ENST00000564464 2231 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC022137.2-201ENST00000503482 481 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AL512310.5-201ENST00000551999 515 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC009486.1-201ENST00000569860 813 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 AC079781.4-201ENST00000641908 219 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 RCC2P1-201ENST00000452257 1476 ntBASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms