Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EYA3Q99504 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EYA3Q99504 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.82■□□□□ 0.28
EYA3Q99504 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 NRADDP-202ENST00000641269 1585 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 AC126755.1-201ENST00000525846 6405 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EYA3Q99504 RNA5SP491-201ENST00000362936 118 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EYA3Q99504 VDAC1P11-201ENST00000458323 852 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.82■□□□□ 0.28
EYA3Q99504 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.82■□□□□ 0.28
EYA3Q99504 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.82■□□□□ 0.28
EYA3Q99504 AL590235.1-201ENST00000564650 861 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.82■□□□□ 0.28
EYA3Q99504 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.82■□□□□ 0.28
EYA3Q99504 MEP1AP1-201ENST00000636082 1097 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.82■□□□□ 0.28
EYA3Q99504 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.82■□□□□ 0.28
EYA3Q99504 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 GUCY2EP-203ENST00000531117 1918 ntBASIC16.82■□□□□ 0.28
EYA3Q99504 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.82■□□□□ 0.28
EYA3Q99504 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EYA3Q99504 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.82■□□□□ 0.28
EYA3Q99504 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 AC008620.2-201ENST00000510294 1569 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 AC061965.1-201ENST00000560524 1465 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 AC020910.6-201ENST00000623084 1459 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.81■□□□□ 0.28
EYA3Q99504 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
EYA3Q99504 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.81■□□□□ 0.28
EYA3Q99504 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.81■□□□□ 0.28
EYA3Q99504 OR7E155P-201ENST00000412208 1014 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.81■□□□□ 0.28
EYA3Q99504 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 AC133141.1-201ENST00000443015 339 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 AC027612.2-202ENST00000445955 1199 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.81■□□□□ 0.28
EYA3Q99504 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.81■□□□□ 0.28
EYA3Q99504 MIR2278-201ENST00000516344 96 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.81■□□□□ 0.28
EYA3Q99504 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.81■□□□□ 0.28
EYA3Q99504 AC048382.6-201ENST00000621980 1223 ntBASIC16.81■□□□□ 0.28
EYA3Q99504 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.81■□□□□ 0.28
EYA3Q99504 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EYA3Q99504 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
EYA3Q99504 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EYA3Q99504 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EYA3Q99504 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.8■□□□□ 0.28
EYA3Q99504 BX640514.1-201ENST00000583223 1918 ntBASIC16.8■□□□□ 0.28
EYA3Q99504 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.8■□□□□ 0.28
EYA3Q99504 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EYA3Q99504 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EYA3Q99504 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EYA3Q99504 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
EYA3Q99504 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EYA3Q99504 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EYA3Q99504 AC139749.1-202ENST00000617529 3139 ntBASIC16.8■□□□□ 0.28
EYA3Q99504 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.8■□□□□ 0.28
EYA3Q99504 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.8■□□□□ 0.28
EYA3Q99504 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.8■□□□□ 0.28
EYA3Q99504 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms