Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP6V0A1Q93050 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AC008620.2-201ENST00000510294 1569 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 RN7SL375P-201ENST00000492442 298 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AC141586.1-203ENST00000567242 366 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 FO393412.1-201ENST00000619841 382 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 CR392039.2-201ENST00000623182 509 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AL928654.5-201ENST00000624831 2501 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 AC117489.1-201ENST00000625169 3217 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 CICP4-201ENST00000447359 2812 ntBASIC15.63■□□□□ 0.09
ATP6V0A1Q93050 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AC024293.1-201ENST00000467930 498 ntBASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 RN7SL396P-201ENST00000471086 295 ntBASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AC093909.3-201ENST00000504783 336 ntBASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AL118522.1-201ENST00000611368 560 ntBASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 AC073592.2-201ENST00000623062 780 ntBASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms