Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.38□□□□□ -0.43
AP3S1Q92572 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
AP3S1Q92572 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.38□□□□□ -0.43
AP3S1Q92572 KRT18P13-201ENST00000400056 1290 ntBASIC12.38□□□□□ -0.43
AP3S1Q92572 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S1Q92572 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.38□□□□□ -0.43
AP3S1Q92572 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.38□□□□□ -0.43
AP3S1Q92572 AC009078.2-202ENST00000463353 338 ntBASIC12.38□□□□□ -0.43
AP3S1Q92572 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S1Q92572 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.38□□□□□ -0.43
AP3S1Q92572 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.38□□□□□ -0.43
AP3S1Q92572 SLC25A1P1-201ENST00000528351 927 ntBASIC12.38□□□□□ -0.43
AP3S1Q92572 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.38□□□□□ -0.43
AP3S1Q92572 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.38□□□□□ -0.43
AP3S1Q92572 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S1Q92572 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S1Q92572 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
AP3S1Q92572 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
AP3S1Q92572 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.38□□□□□ -0.43
AP3S1Q92572 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.38□□□□□ -0.43
AP3S1Q92572 CSPG4P13-202ENST00000567704 4801 ntBASIC12.38□□□□□ -0.43
AP3S1Q92572 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S1Q92572 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AP3S1Q92572 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
AP3S1Q92572 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AC011495.1-201ENST00000498085 584 ntBASIC12.37□□□□□ -0.43
AP3S1Q92572 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AC027369.6-201ENST00000525520 931 ntBASIC12.37□□□□□ -0.43
AP3S1Q92572 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S1Q92572 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S1Q92572 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AP001462.1-201ENST00000594089 452 ntBASIC12.37□□□□□ -0.43
AP3S1Q92572 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S1Q92572 AL390955.2-201ENST00000603032 514 ntBASIC12.37□□□□□ -0.43
AP3S1Q92572 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 AC008040.5-201ENST00000599781 1781 ntBASIC12.37□□□□□ -0.43
AP3S1Q92572 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S1Q92572 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
AP3S1Q92572 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S1Q92572 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S1Q92572 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms