Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC064801.2-201ENST00000625052 1303 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC005229.1-201ENST00000392885 409 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 FAM197Y7-201ENST00000432892 766 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 TTTY23B-201ENST00000442790 549 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 INE1-201ENST00000456273 945 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 RN7SL692P-201ENST00000464677 288 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 FTH1P14-201ENST00000482930 551 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC132938.2-201ENST00000579188 680 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC244669.2-201ENST00000612320 853 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC002472.3-201ENST00000640124 621 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AL591163.1-201ENST00000641757 987 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 FAM95B1-212ENST00000592873 4692 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AL445250.1-201ENST00000641671 2259 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 TMEM14DP-201ENST00000422205 345 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 HMGN1P19-201ENST00000436976 333 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AC008735.3-201ENST00000596646 500 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AL022328.1-201ENST00000610050 478 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AGGF1P10-201ENST00000635005 2191 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 AL590440.2-201ENST00000641973 1595 ntBASIC12.22□□□□□ -0.45
CCDC107Q8WV48 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC107Q8WV48 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms