Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC244157.2-201ENST00000616239 1006 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AL591471.1-201ENST00000621855 229 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AC090386.2-201ENST00000623010 1039 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AC135782.3-201ENST00000562782 2105 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AL590824.1-201ENST00000403828 1349 ntBASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC50Q8IVM0 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC144522.1-201ENST00000625111 1658 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 FAM58BP-201ENST00000439056 645 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC022217.1-201ENST00000521069 738 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 KRT17P8-201ENST00000540749 863 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC140658.4-201ENST00000561990 352 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AC133540.1-201ENST00000620845 1019 ntBASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC50Q8IVM0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms