Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RN7SL277P-201ENST00000481521 288 ntBASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RN7SL665P-201ENST00000578793 300 ntBASIC14.92□□□□□ -0.02
RNF135Q8IUD6 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AC139712.1-201ENST00000378256 1875 ntBASIC14.92□□□□□ -0.02
RNF135Q8IUD6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF135Q8IUD6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AL109809.1-201ENST00000418979 1367 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 KRT8P28-201ENST00000433288 1390 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AL929302.1-201ENST00000426556 871 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 ALG1L3P-201ENST00000503331 765 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AC090136.2-201ENST00000517809 420 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 MTND2P7-201ENST00000521337 640 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AC018846.1-201ENST00000568231 183 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AC008972.2-201ENST00000606587 494 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AC005840.4-201ENST00000541242 2494 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 AGGF1P1-201ENST00000509500 2073 ntBASIC14.91□□□□□ -0.02
RNF135Q8IUD6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF135Q8IUD6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF135Q8IUD6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms