Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC034205.3-201ENST00000603595 1376 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC009779.7-201ENST00000609031 469 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC13.32□□□□□ -0.28
RIF1Q5UIP0 BIN3-212ENST00000640731 450 ntTSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIF1Q5UIP0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AL049792.1-201ENST00000424708 1262 ntBASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 RN7SL5P-201ENST00000581458 321 ntBASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 BICD1P1-201ENST00000457832 1222 ntBASIC13.31□□□□□ -0.28
RIF1Q5UIP0 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 MIR378I-201ENST00000582688 76 ntBASIC13.31□□□□□ -0.28
RIF1Q5UIP0 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIF1Q5UIP0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AL162727.3-201ENST00000635661 2787 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC092284.1-201ENST00000511386 1289 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 SORD2P-201ENST00000558556 1069 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 PTMAP5-202ENST00000607242 1162 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 UBA3-212ENST00000630585 390 ntTSL 4 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms