Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 GOLGA8UP-201ENST00000527159 1755 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PES1P2-201ENST00000449745 1735 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AL358781.1-202ENST00000321081 1360 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AL592076.1-201ENST00000424448 303 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC022494.1-201ENST00000466044 728 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AC134698.3-201ENST00000523880 214 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 AL031673.1-201ENST00000611460 466 ntBASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 GARS-210ENST00000627489 324 ntTSL 4 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 PDXDC2P-206ENST00000534700 1315 ntBASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AL627231.1-201ENST00000394467 1125 ntBASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AL512306.1-201ENST00000432698 848 ntBASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 EEF1DP2-201ENST00000433698 843 ntBASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 IGLV3-15-201ENST00000518356 244 ntBASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.99□□□□□ -0.33
PRICKLE4Q2TBC4 AL133499.1-201ENST00000596207 608 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms