Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 AC015909.5-201ENST00000624336 2266 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 AC025183.3-201ENST00000623526 1482 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.54□□□□□ -0.4
H3F3AP84243 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.54□□□□□ -0.4
H3F3AP84243 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 SNORA50C-201ENST00000408535 133 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 AL807761.2-201ENST00000422849 729 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 AC098934.1-203ENST00000442868 1262 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.54□□□□□ -0.4
H3F3AP84243 CEP164P1-201ENST00000455142 418 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 RN7SL769P-201ENST00000469386 295 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.54□□□□□ -0.4
H3F3AP84243 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.54□□□□□ -0.4
H3F3AP84243 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.54□□□□□ -0.4
H3F3AP84243 KLF17P1-201ENST00000547105 1126 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.54□□□□□ -0.4
H3F3AP84243 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.54□□□□□ -0.4
H3F3AP84243 AC007326.1-201ENST00000604539 458 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 SNORA50.1-201ENST00000628590 135 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H3F3AP84243 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.54□□□□□ -0.4
H3F3AP84243 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 CAP2P1-201ENST00000557743 1390 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 KRT8P18-201ENST00000413425 1445 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3F3AP84243 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.54□□□□□ -0.4
H3F3AP84243 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H3F3AP84243 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H3F3AP84243 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 IMP3P2-201ENST00000489760 475 ntBASIC12.53□□□□□ -0.4
H3F3AP84243 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.53□□□□□ -0.4
H3F3AP84243 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 FGFR3P5-201ENST00000564496 886 ntBASIC12.53□□□□□ -0.4
H3F3AP84243 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.53□□□□□ -0.4
H3F3AP84243 AC015967.2-201ENST00000624092 234 ntBASIC12.53□□□□□ -0.4
H3F3AP84243 AC006435.4-201ENST00000625037 234 ntBASIC12.53□□□□□ -0.4
H3F3AP84243 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 AL356737.1-201ENST00000634391 234 ntBASIC12.53□□□□□ -0.4
H3F3AP84243 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H3F3AP84243 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 CICP8-201ENST00000455800 2813 ntBASIC12.53□□□□□ -0.4
H3F3AP84243 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3F3AP84243 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.53□□□□□ -0.4
H3F3AP84243 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms