Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IRX4P78413 HSPA8P5-201ENST00000456928 2069 ntBASIC14.73□□□□□ -0.05
IRX4P78413 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.73□□□□□ -0.05
IRX4P78413 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.73□□□□□ -0.05
IRX4P78413 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.73□□□□□ -0.05
IRX4P78413 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.73□□□□□ -0.05
IRX4P78413 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.73□□□□□ -0.05
IRX4P78413 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.73□□□□□ -0.05
IRX4P78413 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 AC215219.1-201ENST00000400706 1817 ntBASIC14.73□□□□□ -0.05
IRX4P78413 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.73□□□□□ -0.05
IRX4P78413 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IRX4P78413 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.73□□□□□ -0.05
IRX4P78413 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
IRX4P78413 FP325330.2-201ENST00000624219 5630 ntBASIC14.72□□□□□ -0.05
IRX4P78413 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.72□□□□□ -0.05
IRX4P78413 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
IRX4P78413 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 AC010141.1-201ENST00000411585 623 ntBASIC14.72□□□□□ -0.05
IRX4P78413 AL627389.1-201ENST00000413508 1182 ntBASIC14.72□□□□□ -0.05
IRX4P78413 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 RPS9P1-201ENST00000419943 583 ntBASIC14.72□□□□□ -0.05
IRX4P78413 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 RPL7P35-201ENST00000446943 740 ntBASIC14.72□□□□□ -0.05
IRX4P78413 KLF2P1-201ENST00000447438 1042 ntBASIC14.72□□□□□ -0.05
IRX4P78413 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.72□□□□□ -0.05
IRX4P78413 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.72□□□□□ -0.05
IRX4P78413 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.72□□□□□ -0.05
IRX4P78413 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.72□□□□□ -0.05
IRX4P78413 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
IRX4P78413 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
IRX4P78413 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 AL365181.3-201ENST00000605886 3222 ntBASIC14.72□□□□□ -0.05
IRX4P78413 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
IRX4P78413 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IRX4P78413 AC020910.5-201ENST00000623668 1865 ntBASIC14.72□□□□□ -0.05
IRX4P78413 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IRX4P78413 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms