Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AF013593.1-201ENST00000458074 1487 ntBASIC13.26□□□□□ -0.29
RAE1P78406 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.26□□□□□ -0.29
RAE1P78406 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 RCC2P5-201ENST00000492126 1487 ntBASIC13.26□□□□□ -0.29
RAE1P78406 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.26□□□□□ -0.29
RAE1P78406 RN7SL774P-201ENST00000577467 290 ntBASIC13.26□□□□□ -0.29
RAE1P78406 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 AC243960.2-201ENST00000600996 747 ntBASIC13.26□□□□□ -0.29
RAE1P78406 MIR6769A-201ENST00000617340 73 ntBASIC13.26□□□□□ -0.29
RAE1P78406 AC083964.2-201ENST00000623988 2396 ntBASIC13.26□□□□□ -0.29
RAE1P78406 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.26□□□□□ -0.29
RAE1P78406 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.25□□□□□ -0.29
RAE1P78406 PPP1R2P4-201ENST00000424051 595 ntBASIC13.25□□□□□ -0.29
RAE1P78406 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 AC005722.1-201ENST00000431878 964 ntBASIC13.25□□□□□ -0.29
RAE1P78406 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.25□□□□□ -0.29
RAE1P78406 RPSAP15-201ENST00000448168 861 ntBASIC13.25□□□□□ -0.29
RAE1P78406 AC073150.1-201ENST00000450406 1084 ntBASIC13.25□□□□□ -0.29
RAE1P78406 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.25□□□□□ -0.29
RAE1P78406 BX284668.4-201ENST00000453917 508 ntBASIC13.25□□□□□ -0.29
RAE1P78406 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.25□□□□□ -0.29
RAE1P78406 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.25□□□□□ -0.29
RAE1P78406 PHBP15-201ENST00000574228 665 ntBASIC13.25□□□□□ -0.29
RAE1P78406 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 AC020914.3-201ENST00000594712 304 ntBASIC13.25□□□□□ -0.29
RAE1P78406 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RAE1P78406 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 AC115284.2-201ENST00000624646 2054 ntBASIC13.25□□□□□ -0.29
RAE1P78406 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.25□□□□□ -0.29
RAE1P78406 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.25□□□□□ -0.29
RAE1P78406 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAE1P78406 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAE1P78406 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.24□□□□□ -0.29
RAE1P78406 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.24□□□□□ -0.29
RAE1P78406 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAE1P78406 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RAE1P78406 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RAE1P78406 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAE1P78406 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAE1P78406 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAE1P78406 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.24□□□□□ -0.29
RAE1P78406 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAE1P78406 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms