Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 AC008620.2-201ENST00000510294 1569 ntBASIC15.77■□□□□ 0.11
CCNA1P78396 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.77■□□□□ 0.11
CCNA1P78396 AC020910.6-201ENST00000623084 1459 ntBASIC15.77■□□□□ 0.11
CCNA1P78396 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.77■□□□□ 0.11
CCNA1P78396 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCNA1P78396 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCNA1P78396 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCNA1P78396 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.76■□□□□ 0.11
CCNA1P78396 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.76■□□□□ 0.11
CCNA1P78396 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.76■□□□□ 0.11
CCNA1P78396 LILRP2-202ENST00000413572 1383 ntBASIC15.76■□□□□ 0.11
CCNA1P78396 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CCNA1P78396 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCNA1P78396 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CCNA1P78396 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.76■□□□□ 0.11
CCNA1P78396 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 AC133141.1-201ENST00000443015 339 ntBASIC15.76■□□□□ 0.11
CCNA1P78396 KRT19P4-201ENST00000443208 943 ntBASIC15.76■□□□□ 0.11
CCNA1P78396 AC027612.2-202ENST00000445955 1199 ntBASIC15.76■□□□□ 0.11
CCNA1P78396 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.76■□□□□ 0.11
CCNA1P78396 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.76■□□□□ 0.11
CCNA1P78396 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.76■□□□□ 0.11
CCNA1P78396 AL590235.1-201ENST00000564650 861 ntBASIC15.76■□□□□ 0.11
CCNA1P78396 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.76■□□□□ 0.11
CCNA1P78396 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.76■□□□□ 0.11
CCNA1P78396 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCNA1P78396 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CCNA1P78396 AC012617.1-204ENST00000586340 2305 ntBASIC15.76■□□□□ 0.11
CCNA1P78396 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCNA1P78396 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CCNA1P78396 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 SERBP1P2-201ENST00000436888 1164 ntBASIC15.75■□□□□ 0.11
CCNA1P78396 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.75■□□□□ 0.11
CCNA1P78396 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.75■□□□□ 0.11
CCNA1P78396 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.75■□□□□ 0.11
CCNA1P78396 FBXO36P1-201ENST00000579006 471 ntBASIC15.75■□□□□ 0.11
CCNA1P78396 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.75■□□□□ 0.11
CCNA1P78396 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.75■□□□□ 0.11
CCNA1P78396 AC137723.2-201ENST00000623540 398 ntBASIC15.75■□□□□ 0.11
CCNA1P78396 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCNA1P78396 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNA1P78396 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCNA1P78396 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNA1P78396 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CCNA1P78396 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNA1P78396 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCNA1P78396 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNA1P78396 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNA1P78396 HSPA7-201ENST00000445535 1927 ntBASIC15.74■□□□□ 0.11
CCNA1P78396 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms