Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 ALG1L5P-201ENST00000482043 771 ntBASIC12.59□□□□□ -0.39
VBP1P61758 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.59□□□□□ -0.39
VBP1P61758 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VBP1P61758 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VBP1P61758 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.59□□□□□ -0.39
VBP1P61758 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.58□□□□□ -0.39
VBP1P61758 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.58□□□□□ -0.39
VBP1P61758 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.58□□□□□ -0.39
VBP1P61758 TNKS-213ENST00000522110 2900 ntBASIC12.58□□□□□ -0.39
VBP1P61758 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VBP1P61758 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
VBP1P61758 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VBP1P61758 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.58□□□□□ -0.4
VBP1P61758 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.58□□□□□ -0.4
VBP1P61758 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VBP1P61758 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 AL139400.1-201ENST00000366220 510 ntBASIC12.58□□□□□ -0.4
VBP1P61758 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 SSR4P1-201ENST00000415143 412 ntBASIC12.58□□□□□ -0.4
VBP1P61758 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.58□□□□□ -0.4
VBP1P61758 CEND1P1-201ENST00000451006 455 ntBASIC12.58□□□□□ -0.4
VBP1P61758 AL589987.1-201ENST00000453380 819 ntBASIC12.58□□□□□ -0.4
VBP1P61758 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 KRT18P56-201ENST00000507275 550 ntBASIC12.58□□□□□ -0.4
VBP1P61758 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VBP1P61758 AC126564.1-201ENST00000623628 2013 ntBASIC12.58□□□□□ -0.4
VBP1P61758 AC002472.3-201ENST00000640124 621 ntBASIC12.58□□□□□ -0.4
VBP1P61758 LINC02228-202ENST00000641261 2489 ntBASIC12.58□□□□□ -0.4
VBP1P61758 AC005696.4-201ENST00000614400 3147 ntBASIC12.58□□□□□ -0.4
VBP1P61758 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VBP1P61758 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.58□□□□□ -0.4
VBP1P61758 ELL2P1-201ENST00000413990 1906 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms