Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.55□□□□□ -0.08
ERVFC1P60507 MIR632-201ENST00000385193 94 ntBASIC14.55□□□□□ -0.08
ERVFC1P60507 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.55□□□□□ -0.08
ERVFC1P60507 AC010086.2-201ENST00000428616 226 ntBASIC14.55□□□□□ -0.08
ERVFC1P60507 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.55□□□□□ -0.08
ERVFC1P60507 AC007279.1-201ENST00000448547 837 ntBASIC14.55□□□□□ -0.08
ERVFC1P60507 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.55□□□□□ -0.08
ERVFC1P60507 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.55□□□□□ -0.08
ERVFC1P60507 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.55□□□□□ -0.08
ERVFC1P60507 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.55□□□□□ -0.08
ERVFC1P60507 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.55□□□□□ -0.08
ERVFC1P60507 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
ERVFC1P60507 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
ERVFC1P60507 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERVFC1P60507 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.54□□□□□ -0.08
ERVFC1P60507 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.54□□□□□ -0.08
ERVFC1P60507 RPSAP70-201ENST00000504462 864 ntBASIC14.54□□□□□ -0.08
ERVFC1P60507 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.54□□□□□ -0.08
ERVFC1P60507 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.54□□□□□ -0.08
ERVFC1P60507 AC005746.3-201ENST00000614751 393 ntBASIC14.54□□□□□ -0.08
ERVFC1P60507 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.54□□□□□ -0.08
ERVFC1P60507 AC020904.3-201ENST00000624199 442 ntBASIC14.54□□□□□ -0.08
ERVFC1P60507 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 AC020910.6-201ENST00000623084 1459 ntBASIC14.54□□□□□ -0.08
ERVFC1P60507 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.54□□□□□ -0.08
ERVFC1P60507 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.54□□□□□ -0.08
ERVFC1P60507 CICP4-201ENST00000447359 2812 ntBASIC14.54□□□□□ -0.08
ERVFC1P60507 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.54□□□□□ -0.08
ERVFC1P60507 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ERVFC1P60507 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERVFC1P60507 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC140479.7-201ENST00000636301 2332 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms