Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.41■□□□□ 0.22
NEDD4P46934 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEDD4P46934 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 AC040160.2-201ENST00000623816 1675 ntBASIC16.4■□□□□ 0.22
NEDD4P46934 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 AC020917.4-201ENST00000623994 1999 ntBASIC16.4■□□□□ 0.22
NEDD4P46934 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 AC073548.1-201ENST00000624088 1882 ntBASIC16.4■□□□□ 0.22
NEDD4P46934 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NEDD4P46934 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 IGHV1-12-201ENST00000518307 205 ntBASIC16.4■□□□□ 0.22
NEDD4P46934 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 AC135782.3-201ENST00000562782 2105 ntBASIC16.4■□□□□ 0.22
NEDD4P46934 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NEDD4P46934 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEDD4P46934 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.4■□□□□ 0.22
NEDD4P46934 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEDD4P46934 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NEDD4P46934 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
NEDD4P46934 AC108024.1-201ENST00000626286 1721 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.39■□□□□ 0.21
NEDD4P46934 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 AC117503.4-201ENST00000623229 1418 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 AC245140.2-201ENST00000624054 1939 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.39■□□□□ 0.21
NEDD4P46934 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 AC027612.1-201ENST00000445234 2395 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NEDD4P46934 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NEDD4P46934 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.39■□□□□ 0.21
NEDD4P46934 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NEDD4P46934 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEDD4P46934 HIST2H2BA-201ENST00000412169 381 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.39■□□□□ 0.21
NEDD4P46934 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.39■□□□□ 0.21
NEDD4P46934 AC007279.1-201ENST00000448547 837 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.39■□□□□ 0.21
NEDD4P46934 AP002803.1-201ENST00000528836 498 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 AP000911.2-201ENST00000534330 502 ntBASIC16.39■□□□□ 0.21
NEDD4P46934 AC068867.1-201ENST00000559855 150 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms