Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC1A1P43005 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SLC1A1P43005 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SLC1A1P43005 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC1A1P43005 BNIP3P42-201ENST00000454982 569 ntBASIC14.68□□□□□ -0.06
SLC1A1P43005 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC126915.1-201ENST00000522847 1038 ntBASIC14.68□□□□□ -0.06
SLC1A1P43005 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 KRT8P1-201ENST00000557533 1207 ntBASIC14.68□□□□□ -0.06
SLC1A1P43005 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC1A1P43005 BNIP3P29-201ENST00000598302 571 ntBASIC14.68□□□□□ -0.06
SLC1A1P43005 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC011447.5-201ENST00000616168 564 ntBASIC14.68□□□□□ -0.06
SLC1A1P43005 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC079336.7-201ENST00000623428 1078 ntBASIC14.68□□□□□ -0.06
SLC1A1P43005 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC1A1P43005 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC1A1P43005 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC1A1P43005 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A1P43005 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SLC1A1P43005 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 RNA5SP359-201ENST00000364838 113 ntBASIC14.67□□□□□ -0.06
SLC1A1P43005 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.67□□□□□ -0.06
SLC1A1P43005 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC1A1P43005 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC1A1P43005 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC1A1P43005 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 RCC2P8-201ENST00000502779 1035 ntBASIC14.67□□□□□ -0.06
SLC1A1P43005 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 AL583810.1-201ENST00000553344 1045 ntBASIC14.67□□□□□ -0.06
SLC1A1P43005 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC1A1P43005 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.67□□□□□ -0.06
SLC1A1P43005 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SLC1A1P43005 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms