Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 AC104581.4-201ENST00000623126 3052 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 RCC2P1-201ENST00000452257 1476 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6BP35913 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6BP35913 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.02■□□□□ 0.32
PDE6BP35913 U73169.1-201ENST00000395152 367 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 RN7SKP212-201ENST00000410851 328 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.02■□□□□ 0.32
PDE6BP35913 SDCBP2P1-201ENST00000416115 614 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 TPT1P6-201ENST00000458298 514 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 SNRPD2P2-201ENST00000473818 333 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 MARK2P17-201ENST00000498560 841 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC17.02■□□□□ 0.32
PDE6BP35913 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6BP35913 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6BP35913 AP001462.1-201ENST00000594089 452 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6BP35913 AC009041.4-201ENST00000620075 638 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC17.02■□□□□ 0.32
PDE6BP35913 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6BP35913 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6BP35913 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.02■□□□□ 0.32
PDE6BP35913 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.02■□□□□ 0.32
PDE6BP35913 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6BP35913 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6BP35913 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6BP35913 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PDE6BP35913 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6BP35913 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6BP35913 HLF-202ENST00000430986 1385 ntTSL 2 BASIC17.02■□□□□ 0.31
PDE6BP35913 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.02■□□□□ 0.31
PDE6BP35913 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PDE6BP35913 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PDE6BP35913 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PDE6BP35913 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 AL121753.2-201ENST00000624581 1461 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 AC000077.1-201ENST00000420012 953 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 SNRPCP15-201ENST00000424055 192 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 RN7SL440P-201ENST00000577855 343 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 RN7SL134P-201ENST00000579756 303 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC17.01■□□□□ 0.31
PDE6BP35913 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC17.01■□□□□ 0.31
PDE6BP35913 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 AC004466.2-201ENST00000614749 516 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PDE6BP35913 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 AC113367.3-201ENST00000508316 1912 ntBASIC17.01■□□□□ 0.31
PDE6BP35913 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6BP35913 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms