Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDC27P30260 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC27P30260 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC27P30260 SCARNA12-201ENST00000459155 270 ntBASIC16.2■□□□□ 0.18
CDC27P30260 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC27P30260 MRPL22P1-201ENST00000505398 616 ntBASIC16.2■□□□□ 0.18
CDC27P30260 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.2■□□□□ 0.18
CDC27P30260 AC132825.4-202ENST00000578792 434 ntBASIC16.2■□□□□ 0.18
CDC27P30260 MIR3907-201ENST00000579424 151 ntBASIC16.2■□□□□ 0.18
CDC27P30260 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC27P30260 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 SIGLEC22P-201ENST00000599104 714 ntBASIC16.2■□□□□ 0.18
CDC27P30260 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.2■□□□□ 0.18
CDC27P30260 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CDC27P30260 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC27P30260 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 RCC2P5-201ENST00000492126 1487 ntBASIC16.2■□□□□ 0.18
CDC27P30260 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 AC009474.1-201ENST00000455096 1565 ntBASIC16.2■□□□□ 0.18
CDC27P30260 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC27P30260 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDC27P30260 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 COL6A4P2-202ENST00000504443 2753 ntBASIC16.2■□□□□ 0.18
CDC27P30260 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDC27P30260 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC27P30260 CICP20-201ENST00000443330 2801 ntBASIC16.19■□□□□ 0.18
CDC27P30260 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CDC27P30260 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 ZNF493-208ENST00000599461 1769 ntBASIC16.19■□□□□ 0.18
CDC27P30260 AC040160.2-201ENST00000623816 1675 ntBASIC16.19■□□□□ 0.18
CDC27P30260 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDC27P30260 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC27P30260 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.19■□□□□ 0.18
CDC27P30260 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC27P30260 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC27P30260 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC27P30260 UPF3AP2-201ENST00000457924 1132 ntBASIC16.19■□□□□ 0.18
CDC27P30260 RN7SL769P-201ENST00000469386 295 ntBASIC16.19■□□□□ 0.18
CDC27P30260 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC27P30260 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC27P30260 AL049840.2-201ENST00000602722 535 ntBASIC16.19■□□□□ 0.18
CDC27P30260 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC27P30260 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDC27P30260 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC27P30260 TEKT4P2-202ENST00000559466 1312 ntBASIC16.19■□□□□ 0.18
CDC27P30260 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDC27P30260 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.18■□□□□ 0.18
CDC27P30260 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 AC019109.1-201ENST00000401725 1874 ntBASIC16.18■□□□□ 0.18
CDC27P30260 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC27P30260 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC27P30260 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.18■□□□□ 0.18
CDC27P30260 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDC27P30260 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDC27P30260 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC27P30260 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDC27P30260 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC27P30260 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms