Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AC092580.1-201ENST00000433998 658 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 FAM58BP-201ENST00000439056 645 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 CNN2P10-201ENST00000443067 918 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 RN7SL837P-201ENST00000463010 287 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AC144522.1-201ENST00000625111 1658 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 AL022323.5-201ENST00000624101 2059 ntBASIC11.93□□□□□ -0.5
HIST1H1DP16402 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1DP16402 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1DP16402 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC118758.2-201ENST00000614242 2813 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 AHCYP2-201ENST00000430630 1300 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 CES1P1-201ENST00000421606 1704 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC093462.1-201ENST00000621167 1683 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC012441.2-201ENST00000444843 739 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 KLF2P1-201ENST00000447438 1042 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC007551.1-201ENST00000457394 519 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AC006122.1-201ENST00000493323 440 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 AL355385.1-201ENST00000606123 409 ntBASIC11.92□□□□□ -0.5
HIST1H1DP16402 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1DP16402 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1DP16402 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms