Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.5□□□□□ -0.57
DEFA4P12838 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
DEFA4P12838 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 AL031719.1-201ENST00000623365 2587 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 COX20P2-201ENST00000452636 358 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.5□□□□□ -0.57
DEFA4P12838 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.5□□□□□ -0.57
DEFA4P12838 CR383656.12-201ENST00000549567 513 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.5□□□□□ -0.57
DEFA4P12838 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.5□□□□□ -0.57
DEFA4P12838 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 AL358472.3-201ENST00000608147 415 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 AC105233.6-201ENST00000642093 218 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 AC064801.2-201ENST00000625052 1303 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 FAM95B1-212ENST00000592873 4692 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.5□□□□□ -0.57
DEFA4P12838 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.5□□□□□ -0.57
DEFA4P12838 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 AC135782.3-201ENST00000562782 2105 ntBASIC11.5□□□□□ -0.57
DEFA4P12838 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
DEFA4P12838 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 TNRC18P1-201ENST00000502875 3650 ntBASIC11.49□□□□□ -0.57
DEFA4P12838 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
DEFA4P12838 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
DEFA4P12838 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.49□□□□□ -0.57
DEFA4P12838 RPL7P3-201ENST00000441388 714 ntBASIC11.49□□□□□ -0.57
DEFA4P12838 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.49□□□□□ -0.57
DEFA4P12838 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.49□□□□□ -0.57
DEFA4P12838 AC005225.4-201ENST00000557330 545 ntBASIC11.49□□□□□ -0.57
DEFA4P12838 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.49□□□□□ -0.57
DEFA4P12838 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
DEFA4P12838 TUBB8P4-201ENST00000511806 1324 ntBASIC11.49□□□□□ -0.57
DEFA4P12838 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
DEFA4P12838 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
DEFA4P12838 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms