Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.77□□□□□ -0.21
PCNAP12004 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.77□□□□□ -0.21
PCNAP12004 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCNAP12004 RN7SL163P-201ENST00000583100 276 ntBASIC13.77□□□□□ -0.21
PCNAP12004 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.77□□□□□ -0.21
PCNAP12004 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCNAP12004 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.77□□□□□ -0.21
PCNAP12004 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.77□□□□□ -0.21
PCNAP12004 AC004923.1-202ENST00000642106 209 ntBASIC13.77□□□□□ -0.21
PCNAP12004 AL731571.1-201ENST00000617058 5428 ntBASIC13.77□□□□□ -0.21
PCNAP12004 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PCNAP12004 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCNAP12004 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCNAP12004 AL118506.1-201ENST00000601296 3082 ntBASIC13.77□□□□□ -0.21
PCNAP12004 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCNAP12004 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.76□□□□□ -0.21
PCNAP12004 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.76□□□□□ -0.21
PCNAP12004 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.76□□□□□ -0.21
PCNAP12004 AC092580.1-201ENST00000433998 658 ntBASIC13.76□□□□□ -0.21
PCNAP12004 XBP1P1-201ENST00000436573 652 ntBASIC13.76□□□□□ -0.21
PCNAP12004 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 AC104073.2-201ENST00000453737 312 ntBASIC13.76□□□□□ -0.21
PCNAP12004 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.76□□□□□ -0.21
PCNAP12004 HLA-J-204ENST00000495278 958 ntBASIC13.76□□□□□ -0.21
PCNAP12004 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 FAM8A2P-201ENST00000528813 1142 ntBASIC13.76□□□□□ -0.21
PCNAP12004 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.76□□□□□ -0.21
PCNAP12004 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.76□□□□□ -0.21
PCNAP12004 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.76□□□□□ -0.21
PCNAP12004 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.76□□□□□ -0.21
PCNAP12004 AC090164.2-201ENST00000611487 516 ntBASIC13.76□□□□□ -0.21
PCNAP12004 AL136295.7-201ENST00000619226 1200 ntBASIC13.76□□□□□ -0.21
PCNAP12004 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.76□□□□□ -0.21
PCNAP12004 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.76□□□□□ -0.21
PCNAP12004 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCNAP12004 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.75□□□□□ -0.21
PCNAP12004 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PCNAP12004 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCNAP12004 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCNAP12004 AP002353.1-201ENST00000528257 1599 ntBASIC13.75□□□□□ -0.21
PCNAP12004 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.75□□□□□ -0.21
PCNAP12004 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCNAP12004 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.75□□□□□ -0.21
PCNAP12004 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.75□□□□□ -0.21
PCNAP12004 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCNAP12004 AL590824.1-201ENST00000403828 1349 ntBASIC13.75□□□□□ -0.21
PCNAP12004 TUBB1P2-201ENST00000422712 1306 ntBASIC13.75□□□□□ -0.21
PCNAP12004 TUBB1P1-201ENST00000503144 1300 ntBASIC13.75□□□□□ -0.21
PCNAP12004 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCNAP12004 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.75□□□□□ -0.21
PCNAP12004 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCNAP12004 HMGA1P1-201ENST00000415560 1062 ntBASIC13.75□□□□□ -0.21
PCNAP12004 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.75□□□□□ -0.21
PCNAP12004 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.75□□□□□ -0.21
PCNAP12004 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.75□□□□□ -0.21
PCNAP12004 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.75□□□□□ -0.21
PCNAP12004 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.75□□□□□ -0.21
PCNAP12004 AC005740.2-201ENST00000511085 419 ntBASIC13.75□□□□□ -0.21
PCNAP12004 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.75□□□□□ -0.21
PCNAP12004 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms