Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
KRT6AP02538 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
KRT6AP02538 AC078875.1-201ENST00000431907 724 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.67□□□□□ -0.22
KRT6AP02538 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.67□□□□□ -0.22
KRT6AP02538 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.67□□□□□ -0.22
KRT6AP02538 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.67□□□□□ -0.22
KRT6AP02538 RN7SL163P-201ENST00000583100 276 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.67□□□□□ -0.22
KRT6AP02538 BNIP3P13-201ENST00000599968 566 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 AC009542.2-202ENST00000619004 1067 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 AL035252.4-201ENST00000624174 288 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 AL591122.2-201ENST00000624125 1853 ntBASIC13.67□□□□□ -0.22
KRT6AP02538 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.67□□□□□ -0.22
KRT6AP02538 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRT6AP02538 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.67□□□□□ -0.22
KRT6AP02538 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 OR2I1P-208ENST00000641137 4948 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
KRT6AP02538 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 MIR663B-201ENST00000408361 115 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.66□□□□□ -0.22
KRT6AP02538 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 HILS1-202ENST00000545329 423 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 RN7SL560P-201ENST00000577943 264 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
KRT6AP02538 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 AC017083.2-201ENST00000608069 979 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 MIR6805-201ENST00000615055 62 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 AC025183.3-201ENST00000623526 1482 ntBASIC13.66□□□□□ -0.22
KRT6AP02538 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KRT6AP02538 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.66□□□□□ -0.22
KRT6AP02538 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRT6AP02538 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms