Protein–RNA interactions for Protein: A0A1W2PPD8

KDM4F, Lysine demethylase 4F, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4FA0A1W2PPD8 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.31■□□□□ 0.68
KDM4FA0A1W2PPD8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC109326.1-201ENST00000624705 1321 ntBASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 IGLV4-60-201ENST00000390284 362 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 ZCRB1-205ENST00000552673 907 ntTSL 3 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 CMC2-223ENST00000570195 871 ntTSL 3 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 MIR4327-201ENST00000581194 85 ntBASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC068620.2-201ENST00000602927 529 ntBASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC021683.4-201ENST00000623348 1099 ntBASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AC127526.5-201ENST00000637148 1110 ntBASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4FA0A1W2PPD8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AL590552.1-201ENST00000623164 1770 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC080080.1-201ENST00000625121 2420 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 PLP2-201ENST00000376322 620 ntTSL 2 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 THUMPD1P1-201ENST00000400014 1041 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AL357054.1-201ENST00000407035 1227 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AL162386.1-201ENST00000433817 645 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC011092.1-201ENST00000533128 1047 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 CLCF1-202ENST00000533438 967 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 RBM17P4-201ENST00000558517 1192 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC113208.2-201ENST00000565381 608 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC124319.1-201ENST00000576808 653 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AL121658.1-201ENST00000608489 712 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 MIR6511B1-201ENST00000612014 85 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 FAM25BP-203ENST00000624613 404 ntTSL 3 BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 AC018442.1-201ENST00000421439 2061 ntBASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4FA0A1W2PPD8 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms