Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 LINC02486-201ENST00000604157 3000 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 YBX1P6-201ENST00000442962 1002 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 KLF2P1-201ENST00000447438 1042 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 TUBB8P8-201ENST00000458717 1058 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 AC006122.1-201ENST00000493323 440 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 PGAM1P5-201ENST00000548011 764 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 AC003686.1-201ENST00000550956 1034 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 DUX4L45-201ENST00000566406 1057 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 MIR4783-201ENST00000580343 82 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 AC012645.4-201ENST00000610691 1061 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 AL928654.5-201ENST00000624831 2501 ntBASIC13.24□□□□□ -0.29
IFT52Q9Y366 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IFT52Q9Y366 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFT52Q9Y366 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AC061965.1-201ENST00000560524 1465 ntBASIC13.23□□□□□ -0.29
IFT52Q9Y366 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 MEX3B-202ENST00000558133 4333 ntBASIC13.23□□□□□ -0.29
IFT52Q9Y366 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AL160314.3-201ENST00000556041 767 ntBASIC13.23□□□□□ -0.29
IFT52Q9Y366 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AC005962.1-201ENST00000584100 773 ntBASIC13.23□□□□□ -0.29
IFT52Q9Y366 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFT52Q9Y366 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
IFT52Q9Y366 AC107375.1-201ENST00000564464 2231 ntBASIC13.23□□□□□ -0.29
IFT52Q9Y366 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms