Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZC3H4Q9UPT8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 AC041040.1-201ENST00000425197 460 ntBASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PPY-202ENST00000587006 431 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 ACE3P-201ENST00000423435 1973 ntBASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PES1P2-201ENST00000449745 1735 ntBASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZC3H4Q9UPT8 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 IQCF4-203ENST00000428561 420 ntBASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AC079331.1-201ENST00000623200 1200 ntBASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 GUCY2EP-203ENST00000531117 1918 ntBASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZC3H4Q9UPT8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 MYADML-201ENST00000474610 2147 ntBASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms