Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FAM90A14P-201ENST00000530386 1395 ntBASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 FAM90A13P-201ENST00000534703 1395 ntBASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.53□□□□□ -0.24
LRIT1Q9P2V4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LRIT1Q9P2V4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AP000354.1-201ENST00000396982 456 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 MIR1307-201ENST00000408840 149 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AQP7P5-201ENST00000428759 1049 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AQP7P4-201ENST00000447083 1042 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AQP7P2-201ENST00000453967 1041 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AC025186.1-201ENST00000478174 870 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 PGAM1P12-201ENST00000505622 748 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AL049840.2-201ENST00000602722 535 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AQP7P3-201ENST00000624547 1041 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 AC002472.4-201ENST00000641915 272 ntBASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LRIT1Q9P2V4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.51□□□□□ -0.25
LRIT1Q9P2V4 KRT18P66-201ENST00000452970 1269 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms