Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COL20A1Q9P218 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COL20A1Q9P218 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.66■□□□□ 0.1
COL20A1Q9P218 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.66■□□□□ 0.1
COL20A1Q9P218 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COL20A1Q9P218 AC011474.4-201ENST00000623523 2076 ntBASIC15.66■□□□□ 0.1
COL20A1Q9P218 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL20A1Q9P218 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AC041040.1-201ENST00000425197 460 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 KRT17P4-201ENST00000429445 819 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AP005264.6-204ENST00000588436 719 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AC072061.1-201ENST00000569710 2234 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AC005014.1-201ENST00000432006 2976 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL20A1Q9P218 AC023794.5-201ENST00000564380 2157 ntBASIC15.65■□□□□ 0.1
COL20A1Q9P218 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL20A1Q9P218 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 SNORA50C-201ENST00000408535 133 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 AC005077.3-201ENST00000449614 213 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 RN7SL351P-201ENST00000469306 248 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 ALG1L3P-201ENST00000503331 765 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 AC087203.1-201ENST00000532111 1181 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 AC073869.4-201ENST00000620841 800 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 SNORA50.1-201ENST00000628590 135 ntBASIC15.64■□□□□ 0.09
COL20A1Q9P218 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.64■□□□□ 0.09
COL20A1Q9P218 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL20A1Q9P218 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL20A1Q9P218 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms