Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 AC093462.1-201ENST00000621167 1683 ntBASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.29■□□□□ 0.2
CHAMP1Q96JM3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AC073862.5-201ENST00000624129 2027 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 ANKRD19P-201ENST00000338192 862 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 KRT223P-202ENST00000449164 1292 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AP005482.1-201ENST00000563722 1273 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AC005730.2-201ENST00000564549 1184 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 MIR4741-201ENST00000579822 90 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 MIR6727-201ENST00000620702 65 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AC007336.3-201ENST00000623886 2160 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 LINC01815-202ENST00000641468 1409 ntBASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHAMP1Q96JM3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 AC126335.2-201ENST00000623362 4637 ntBASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 SHMT1P1-201ENST00000419974 1312 ntBASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.27■□□□□ 0.2
CHAMP1Q96JM3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms