Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 ABCD1P2-201ENST00000429313 1601 ntBASIC16.45■□□□□ 0.22
STAG1Q8WVM7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
STAG1Q8WVM7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RNVU1-8-201ENST00000364272 125 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 GGTLC4P-201ENST00000402176 664 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 STK24P1-201ENST00000455035 1291 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RNA5SP417-201ENST00000516459 108 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 MIR3180-2-201ENST00000581748 88 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 MIR4649-201ENST00000582839 64 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AC005618.3-201ENST00000624928 458 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 AC020917.4-201ENST00000623994 1999 ntBASIC16.44■□□□□ 0.22
STAG1Q8WVM7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
STAG1Q8WVM7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.43■□□□□ 0.22
STAG1Q8WVM7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 OR52M2P-201ENST00000414298 959 ntBASIC16.43■□□□□ 0.22
STAG1Q8WVM7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.43■□□□□ 0.22
STAG1Q8WVM7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms