Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 BANF1P3-201ENST00000412556 261 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC234782.1-201ENST00000451950 919 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 IGLV3-15-201ENST00000518356 244 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 PHBP15-201ENST00000574228 665 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 MIR3907-201ENST00000579424 151 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AL133499.1-201ENST00000596207 608 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC015967.2-201ENST00000624092 234 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC006435.4-201ENST00000625037 234 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AL356737.1-201ENST00000634391 234 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AC006453.1-201ENST00000636037 1257 ntBASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SMARCC2Q8TAQ2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 OR2K2-202ENST00000374428 1038 ntBASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 OR8T1P-201ENST00000421347 918 ntBASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AL161773.1-201ENST00000624845 863 ntBASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC067931.2-201ENST00000623655 2003 ntBASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC099521.3-201ENST00000624251 2938 ntBASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 KRT18P9-201ENST00000604826 1300 ntBASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMARCC2Q8TAQ2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 DGCR9-201ENST00000609630 2415 ntBASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms