Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 AC018735.1-201ENST00000437208 1502 ntBASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 RCC2P5-201ENST00000492126 1487 ntBASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 AC010328.2-201ENST00000597698 1111 ntBASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKAL1Q5VV42 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 MEX3B-202ENST00000558133 4333 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AL118506.1-201ENST00000601296 3082 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC102953.2-201ENST00000609755 3026 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC004554.1-201ENST00000422830 1468 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 RN7SL530P-201ENST00000485097 298 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SLC25A15P3-201ENST00000505530 290 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 RNA5SP412-201ENST00000516234 123 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 MIR3940-201ENST00000579148 102 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC007663.3-201ENST00000609632 465 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC091271.1-201ENST00000611877 1162 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 AC012531.1-201ENST00000562848 2680 ntBASIC15.29■□□□□ 0.04
CDKAL1Q5VV42 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms