Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BCL2-203ENST00000589955 5011 ntBASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 CD9-212ENST00000610354 1315 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 AADAC-202ENST00000488869 719 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 GOLGA2P10-201ENST00000550961 817 ntBASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42BPAQ5VT25 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 SLC25A51P3-201ENST00000521814 889 ntBASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 FTH1-205ENST00000529631 507 ntTSL 4 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 LINC00638-201ENST00000555578 2518 ntBASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 FAM183BP-201ENST00000409072 1595 ntBASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC20.33■□□□□ 0.85
CDC42BPAQ5VT25 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 CR383656.2-201ENST00000548656 2254 ntBASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 RPL10P8-201ENST00000522888 313 ntBASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL300P-201ENST00000582522 318 ntBASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 AC099795.2-201ENST00000639582 440 ntBASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 POM121L4P-202ENST00000427789 1891 ntBASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 AC073869.1-201ENST00000415574 2762 ntBASIC20.33■□□□□ 0.84
CDC42BPAQ5VT25 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 CA5BP1-205ENST00000435806 1064 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms