Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AF013593.1-201ENST00000458074 1487 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 AC006372.4-201ENST00000624122 1543 ntBASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.03□□□□□ -0.32
PRICKLE4Q2TBC4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 LINC00638-201ENST00000555578 2518 ntBASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRICKLE4Q2TBC4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 AC005722.1-201ENST00000431878 964 ntBASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 AC007279.1-201ENST00000448547 837 ntBASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 COQ10BP2-201ENST00000513804 724 ntBASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 AL356740.1-201ENST00000602192 1297 ntBASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 AC020763.3-201ENST00000625095 2904 ntBASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRICKLE4Q2TBC4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 AC234782.1-201ENST00000451950 919 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 SCARNA12-201ENST00000459155 270 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 NDUFS6P1-201ENST00000485187 316 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 IMP3P2-201ENST00000489760 475 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 MIR4265-201ENST00000582152 99 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 AL021578.1-201ENST00000613646 709 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 AC108024.1-201ENST00000626286 1721 ntBASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRICKLE4Q2TBC4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13□□□□□ -0.33
PRICKLE4Q2TBC4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms