Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ACTG1P17-201ENST00000558391 1119 ntBASIC16.5■□□□□ 0.23
MRE11P49959 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MRE11P49959 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 MIR6069-201ENST00000620069 79 ntBASIC16.5■□□□□ 0.23
MRE11P49959 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 HLA-C-210ENST00000640219 976 ntBASIC16.5■□□□□ 0.23
MRE11P49959 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
MRE11P49959 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MRE11P49959 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC16.5■□□□□ 0.23
MRE11P49959 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC16.5■□□□□ 0.23
MRE11P49959 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRE11P49959 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MRE11P49959 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 AC064801.2-201ENST00000625052 1303 ntBASIC16.49■□□□□ 0.23
MRE11P49959 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRE11P49959 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.49■□□□□ 0.23
MRE11P49959 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.49■□□□□ 0.23
MRE11P49959 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.49■□□□□ 0.23
MRE11P49959 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.49■□□□□ 0.23
MRE11P49959 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 SLC25A47P1-201ENST00000531577 414 ntBASIC16.49■□□□□ 0.23
MRE11P49959 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.49■□□□□ 0.23
MRE11P49959 AC023310.3-201ENST00000557027 670 ntBASIC16.49■□□□□ 0.23
MRE11P49959 AC100756.1-201ENST00000562736 682 ntBASIC16.49■□□□□ 0.23
MRE11P49959 DUX4L47-201ENST00000566374 394 ntBASIC16.49■□□□□ 0.23
MRE11P49959 AC138749.3-201ENST00000567691 622 ntBASIC16.49■□□□□ 0.23
MRE11P49959 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MRE11P49959 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.49■□□□□ 0.23
MRE11P49959 SRD5A3P1-201ENST00000603021 949 ntBASIC16.49■□□□□ 0.23
MRE11P49959 LINC01115-203ENST00000606068 577 ntBASIC16.49■□□□□ 0.23
MRE11P49959 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.49■□□□□ 0.23
MRE11P49959 AC116165.1-201ENST00000611806 668 ntBASIC16.49■□□□□ 0.23
MRE11P49959 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 AC148477.9-201ENST00000623974 539 ntBASIC16.49■□□□□ 0.23
MRE11P49959 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.49■□□□□ 0.23
MRE11P49959 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.49■□□□□ 0.23
MRE11P49959 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC16.49■□□□□ 0.23
MRE11P49959 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRE11P49959 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
MRE11P49959 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.49■□□□□ 0.23
MRE11P49959 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRE11P49959 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MRE11P49959 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC16.48■□□□□ 0.23
MRE11P49959 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 AC139712.1-201ENST00000378256 1875 ntBASIC16.48■□□□□ 0.23
MRE11P49959 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 AC108024.1-201ENST00000626286 1721 ntBASIC16.48■□□□□ 0.23
MRE11P49959 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 MIR33B-201ENST00000385104 96 ntBASIC16.48■□□□□ 0.23
MRE11P49959 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.48■□□□□ 0.23
MRE11P49959 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 RPL13AP20-201ENST00000459725 609 ntBASIC16.48■□□□□ 0.23
MRE11P49959 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRE11P49959 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.48■□□□□ 0.23
MRE11P49959 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.48■□□□□ 0.23
MRE11P49959 AC131206.1-201ENST00000538078 1211 ntBASIC16.48■□□□□ 0.23
MRE11P49959 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
MRE11P49959 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 AC044860.1-202ENST00000559481 777 ntBASIC16.48■□□□□ 0.23
MRE11P49959 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.48■□□□□ 0.23
MRE11P49959 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.48■□□□□ 0.23
MRE11P49959 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms